bsxplorer.BAMReader.__init__

BAMReader.__init__(bam_filename: str | Path, index_filename: str | Path, cytosine_file: str | Path | None = None, bamtype: Literal['bismark'] = 'bismark', regions: DataFrame | None = None, threads: int = 1, batch_num: int = 10000.0, min_qual: int | None = None, context: Literal['CG', 'CHG', 'CHH', 'all'] = 'all', keep_converted: bool = True, qc: bool = True, readahead=5, **pysam_kwargs)