ChrLevels

ChrLevels class.

class ChrLevels

__init__(df: DataFrame) → None

Read report and visualize chromosome methylation levels

Parameters:

df –

Methods

from_bismark	Initialize ChrLevels with CX_report file
from_cgmap	Initialize ChrLevels with CGMap file
from_bedGraph	Initialize ChrLevels with CGMap file
from_coverage	Initialize ChrLevels with CGMap file
from_binom	Initialize ChrLevels with .parquet file from Binom.
save_plot_rds	Saves plot data in a rds DataFrame with columns:
filter	Filter chromosome methylation levels data.
line_plot
box_plot	rtype: BoxPlot