bsxplorer.BinomialData

class BinomialData[source]

Methods

from_report

Method to preprocess BS-seq cytosine report data by calculating methylation P-value for every cytosine (assuming distribution is binomial) that passes min_coverage threshold.

read_total_stats

Get methylation stats from methylation reports file.

region_pvalue

Map cytosines with provided annotation and calculate region methylation P-value (assuming distribution is binomial).