BSXplorer
Scenarios
Getting started
I. EDA of BSSeq data generated from non-model organism
II. EDA of BSSeq data generated from non-model organism in different conditions
III. EDA of BSSeq data generated from in different non-model organisms
Tutorials
Lineplot
Console usage
Reference
Metagene
Plots
Binomial
Genome
ChrLevels
Cluster
Sequence
BAM
Universal I/O
Reference
bsxplorer.UniversalReader
bsxplorer.UniversalReplicatesReader
bsxplorer.UniversalWriter
bsxplorer.UniversalBatch
UniversalBatch
bsxplorer.UniversalBatch.__init__
bsxplorer.UniversalBatch.colnames
bsxplorer.UniversalBatch.filter_data
bsxplorer.UniversalBatch.filter_not_none
bsxplorer.UniversalBatch.get_validated
bsxplorer.UniversalBatch.pa_schema
bsxplorer.UniversalBatch.pl_schema
bsxplorer.UniversalBatch.to_arrow
bsxplorer.UniversalBatch.to_bedGraph
bsxplorer.UniversalBatch.to_bismark
bsxplorer.UniversalBatch.to_cgmap
bsxplorer.UniversalBatch.to_coverage
Reading and writing
BSXplorer
Universal I/O
bsxplorer.UniversalBatch
bsxplorer.UniversalBatch.__init__
bsxplorer.UniversalBatch.__init__
UniversalBatch.
__init__
(
data
:
DataFrame
,
raw
:
Table
|
RecordBatch
|
None
)
[source]